Disease: Ankylosing spondylitis
Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 34
rs4246905
TNFSF15
0.716 0.400 9 114790969 missense variant T/A;C snv 0.76 15
rs1883832
CD40
0.581 0.680 20 46118343 5 prime UTR variant T/C snv 0.75 0.80 7
rs3747517
IFIH1
0.732 0.360 2 162272314 missense variant T/C snv 0.68 0.68 5
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 61
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 55
rs469758
LOC102724748 ; ERAP1
0.827 0.120 5 96786011 intron variant C/T snv 0.62 0.63 5
rs11574938
ITGAL
0.827 0.120 16 30474072 missense variant G/A;C snv 0.62 6
rs2234161
TNFRSF14
0.827 0.120 1 2559766 non coding transcript exon variant C/T snv 4.1E-05; 0.55 0.58 5
rs1801274
FCGR2A
0.597 0.800 1 161509955 missense variant A/C;G snv 4.0E-06; 0.48 7
rs12928404
ATXN2L
0.724 0.240 16 28835925 splice region variant T/C snv 0.44 0.45 15
rs602662
LOC105447645 ; FUT2
0.716 0.280 19 48703728 missense variant G/A snv 0.40 0.47 15
rs174535
MYRF ; TMEM258
0.776 0.280 11 61783884 missense variant T/A;C;G snv 0.38 0.32 11
rs12718244
SPATA48
0.827 0.120 7 50136058 intron variant G/A snv 0.33 0.33 6
rs11230563
LOC105369326 ; CD6
0.790 0.360 11 61008737 missense variant C/G;T snv 4.2E-06; 0.31 6
rs2236379
PRKCQ
0.790 0.160 10 6485181 missense variant G/A snv 0.31 0.30 6
rs1893592
UBASH3A
0.742 0.280 21 42434957 missense variant A/C;G snv 0.27; 8.0E-06 7
rs3197999
MST1 ; APEH
0.732 0.280 3 49684099 missense variant G/A snv 0.26 0.27 7
rs2024092
SBNO2
0.827 0.120 19 1124032 intron variant G/A snv 0.24 0.26 6
rs3749171
GPR35
0.807 0.120 2 240630275 missense variant C/T snv 0.16; 9.4E-06 0.19 6
rs12720356
TYK2
0.752 0.360 19 10359299 missense variant A/C;G snv 6.1E-02; 4.0E-06 7
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 6
rs11209026
IL23R
0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02 5
rs35874463
SMAD3
0.827 0.120 15 67165360 missense variant A/G snv 4.0E-02 3.4E-02 7
rs35074907
KEAP1
0.807 0.160 19 10489742 synonymous variant G/A snv 1.9E-02 1.5E-02 6